When any positional feature is selected the sequence display panel, the residue or sequence range is highlighted in yellow rectangles and the same residues/features are selected in the 3D display panel and highlighted in green.Both panels are dynamically connected so selecting/deselecting a region or residue in one of them will trigger the same selection/deselection in the other.Mol* UI can be used to explore the different assemblies that are available in the current PDB.Displays the 3D structure of first assembly in the PDB entry in Mol*.RCSB PDB PFV documentation applies ( link).

The drop down menu in the top left corner of the panel allows users to change the entity and explore its first instance in the current assembly.Displays positional features for a single protein.The following conventions are used for the two dynamically connected panels This operation allows users to highlight protein residues of interest in 3D structures to explore their local 1D sequence annotations, integrated from various resources. Project 3D protein residues into 1D graphical summaries of protein features.

The 3D PFV allows users to visualize protein positional features annotations from RCSB PDB, UniProt, CATH and SCOPe in 3D and explore neighboring structural features.

Map protein positional features from 1D sequences onto 3D structures.

This resource integrates 3D structural information of protein assemblies and 1D positional features of protein sequences and presents it in two dynamically connected panels. The integrated information is displayed in two dynamically connected panels: the Mol* plugin displays the 3D structures of protein assemblies and the RCSB PDB PFV shows the protein sequence positional features. This resource integrates structural information from the RCSB PDB and protein positional features (such as sites of mutation, catalytic residues, and secondary structural regions) from external resources including UniProt, CATH and SCOPe. The 3D Protein Feature View (PFV) maps protein sequence features ( i.e., 1D protein positions of interest) onto the 3D structure of protein assemblies for visualization and analysis.

For Developers Introduction What is the 3D Protein Feature View?.

Diversity, Equity, Inclusion, and Access.

Citation, Usage, Privacy Policies, Logo.

Biologically Interesting Molecule Reference Dictionary (BIRD).

Download free protein structure